ClinVar Miner

Submissions for variant NM_001130438.3(SPTAN1):c.6042T>G (p.Ser2014=)

gnomAD frequency: 0.00023  dbSNP: rs142830725
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Genetic Services Laboratory, University of Chicago RCV000147644 SCV000195093 benign not specified 2013-02-08 criteria provided, single submitter clinical testing
Invitae RCV000230531 SCV000286170 likely benign Early infantile epileptic encephalopathy with suppression bursts 2023-12-06 criteria provided, single submitter clinical testing
GeneDx RCV000147644 SCV000514767 benign not specified 2015-05-20 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Genome-Nilou Lab RCV001808408 SCV002056698 benign Developmental and epileptic encephalopathy, 5 2021-07-15 criteria provided, single submitter clinical testing
Ambry Genetics RCV002354335 SCV002657786 benign Inborn genetic diseases 2019-06-29 criteria provided, single submitter clinical testing This alteration is classified as benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

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