ClinVar Miner

Submissions for variant NM_001130682.3(GUCY1A1):c.334_335del (p.Glu112fs)

dbSNP: rs781020381
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratorio de Genetica e Diagnostico Molecular, Hospital Israelita Albert Einstein RCV002252210 SCV002523135 uncertain significance See cases 2021-04-26 criteria provided, single submitter clinical testing ACMG classification criteria: PS4, PM2, PM3
Ambry Genetics RCV004026148 SCV004879571 pathogenic not specified 2021-05-18 criteria provided, single submitter clinical testing The c.334_335delGA (p.E112Rfs*3) alteration, located in exon 5 (coding exon 3) of the GUCY1A3 gene, consists of a deletion of 2 nucleotides from position 334 to 335, causing a translational frameshift with a predicted alternate stop codon after 3 amino acids. This alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay. Based on data from the Genome Aggregation Database (gnomAD) database, the GUCY1A3 c.334_335delGA alteration was observed in 0.007% (17/248,772) of total alleles studied, with a frequency of 0.04% (13/33,908) in the Latino subpopulation. This alteration was confirmed compound heterozygous with c.1550G>A, p.C517Y, in a 3 year old female patient with a diagnosis of Moyamoya disease (Wallace, 2016). Exome sequencing was performed on the patient, her unaffected parents, and two unaffected sisters. The patient had two strokes, dysphagia, hypertension, and a brain MRI showing evidence of bilateral middle cerebral artery infarcts and generalized volume loss. Based on the available evidence, this alteration is classified as pathogenic.
OMIM RCV000677375 SCV000803638 pathogenic Moyamoya disease with early-onset achalasia 2018-08-16 no assertion criteria provided literature only
University of Washington Center for Mendelian Genomics, University of Washington RCV000755173 SCV000882998 pathogenic Moyamoya disease 1 no assertion criteria provided research

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