ClinVar Miner

Submissions for variant NM_001134831.2(AHI1):c.281C>T (p.Thr94Met)

gnomAD frequency: 0.00001  dbSNP: rs373490556
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002041018 SCV002308676 uncertain significance Familial aplasia of the vermis 2022-02-11 criteria provided, single submitter clinical testing This sequence change replaces threonine, which is neutral and polar, with methionine, which is neutral and non-polar, at codon 94 of the AHI1 protein (p.Thr94Met). This variant is present in population databases (rs373490556, gnomAD 0.01%). This variant has not been reported in the literature in individuals affected with AHI1-related conditions. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt AHI1 protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Fulgent Genetics, Fulgent Genetics RCV002498064 SCV002784182 uncertain significance Joubert syndrome 3 2022-05-27 criteria provided, single submitter clinical testing
Ambry Genetics RCV003348766 SCV004075397 likely benign Inborn genetic diseases 2023-08-20 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

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