ClinVar Miner

Submissions for variant NM_001165963.4(SCN1A):c.2808C>G (p.Asp936Glu)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Unidad de Genómica Garrahan, Hospital de Pediatría Garrahan RCV004596626 SCV005088633 likely pathogenic Severe myoclonic epilepsy in infancy 2024-01-01 criteria provided, single submitter clinical testing Heterozygous missense variant in SCN1A gene, predicted to result in a D936E change, located in the exon 18, involving the DII – pore loop, a well established functional domain of the protein (PM1), with no reported missense benign variants (PP2). The variant has extremely low frequency in gnomAD population databases (PM2). There are reports of patogenic variants resulting in a different aminoacid change in the same codon: chr2:166037916:C>A, chr2:166037915:T>G, chr2:166037916:C>G, chr2:166037915:T>C (PM5)(PMID:23485646). Multiple computational prediction tools support a deleteroius effect on the gene (PP3mod). Present in a female patient diagnosed with Dravet Syndrome, a condition strongly associated with variants in SCN1A gene (PP4strong).

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