ClinVar Miner

Submissions for variant NM_001166108.2(PALLD):c.2552G>T (p.Cys851Phe)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV004062027 SCV002738802 uncertain significance not specified 2023-10-09 criteria provided, single submitter clinical testing The p.C834F variant (also known as c.2501G>T), located in coding exon 13 of the PALLD gene, results from a G to T substitution at nucleotide position 2501. The cysteine at codon 834 is replaced by phenylalanine, an amino acid with highly dissimilar properties. This amino acid position is conserved. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Invitae RCV003101897 SCV003286748 uncertain significance Pancreatic adenocarcinoma 2021-12-31 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Benign"; Align-GVGD: "Class C65"). This variant has not been reported in the literature in individuals affected with PALLD-related conditions. This variant is present in population databases (no rsID available, gnomAD 0.0009%). This sequence change replaces cysteine, which is neutral and slightly polar, with phenylalanine, which is neutral and non-polar, at codon 347 of the PALLD protein (p.Cys347Phe).

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