ClinVar Miner

Submissions for variant NM_001166108.2(PALLD):c.2906G>A (p.Arg969His)

gnomAD frequency: 0.00001  dbSNP: rs769973229
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000822627 SCV000963437 uncertain significance Pancreatic adenocarcinoma 2021-12-25 criteria provided, single submitter clinical testing ClinVar contains an entry for this variant (Variation ID: 664520). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive. This variant has not been reported in the literature in individuals affected with PALLD-related conditions. This variant is present in population databases (rs769973229, gnomAD 0.01%). This sequence change replaces arginine, which is basic and polar, with histidine, which is basic and polar, at codon 465 of the PALLD protein (p.Arg465His).
Ambry Genetics RCV004029110 SCV002745833 uncertain significance not specified 2022-09-16 criteria provided, single submitter clinical testing The p.R952H variant (also known as c.2855G>A), located in coding exon 16 of the PALLD gene, results from a G to A substitution at nucleotide position 2855. The arginine at codon 952 is replaced by histidine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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