ClinVar Miner

Submissions for variant NM_001184880.2(PCDH19):c.2480G>A (p.Arg827His)

gnomAD frequency: 0.00004  dbSNP: rs371323886
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000792313 SCV000931600 uncertain significance Developmental and epileptic encephalopathy, 9 2023-02-16 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) has been performed at Invitae for this missense variant, however the output from this modeling did not meet the statistical confidence thresholds required to predict the impact of this variant on PCDH19 protein function. This sequence change replaces arginine, which is basic and polar, with histidine, which is basic and polar, at codon 827 of the PCDH19 protein (p.Arg827His). This variant is present in population databases (rs371323886, gnomAD 0.007%). This variant has not been reported in the literature in individuals affected with PCDH19-related conditions. ClinVar contains an entry for this variant (Variation ID: 639503).

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