ClinVar Miner

Submissions for variant NM_001184880.2(PCDH19):c.2938C>T (p.Arg980Cys)

gnomAD frequency: 0.00118  dbSNP: rs3764758
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000147077 SCV000170894 benign not specified 2013-04-17 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Genetic Services Laboratory, University of Chicago RCV000147077 SCV000194427 likely benign not specified 2013-03-27 criteria provided, single submitter clinical testing
Eurofins Ntd Llc (ga) RCV000147077 SCV000231617 benign not specified 2014-05-27 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000463342 SCV000559643 benign Developmental and epileptic encephalopathy, 9 2025-02-02 criteria provided, single submitter clinical testing
Ambry Genetics RCV002312911 SCV000847603 benign Inborn genetic diseases 2016-07-18 criteria provided, single submitter clinical testing This alteration is classified as benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

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