ClinVar Miner

Submissions for variant NM_001199107.2(TBC1D24):c.253C>T (p.His85Tyr)

dbSNP: rs2065739166
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001055715 SCV001220119 uncertain significance Developmental and epileptic encephalopathy, 1; Autosomal dominant nonsyndromic hearing loss 65; Caused by mutation in the TBC1 domain family, member 24 2019-04-09 criteria provided, single submitter clinical testing This variant has not been reported in the literature in individuals with TBC1D24-related conditions. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may create or strengthen a splice site, but this prediction has not been confirmed by published transcriptional studies. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Possibly Damaging"; Align-GVGD: "Class C0"). This variant is not present in population databases (ExAC no frequency). This sequence change replaces histidine with tyrosine at codon 85 of the TBC1D24 protein (p.His85Tyr). The histidine residue is moderately conserved and there is a moderate physicochemical difference between histidine and tyrosine.

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