ClinVar Miner

Submissions for variant NM_001204.7(BMPR2):c.600A>C (p.Leu200=)

gnomAD frequency: 0.01458  dbSNP: rs55722784
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Total submissions: 9
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000150191 SCV000197112 benign not specified 2013-02-21 criteria provided, single submitter clinical testing Leu200Leu in exon 5 of BMPR2: This variant is not expected to have clinical sign ificance because it does not alter an amino acid residue and is not located with in the splice consensus sequence. It has been identified in 1.6% (135/8600) of E uropean American chromosomes from a broad population by the NHLBI Exome Sequenci ng Project (http://evs.gs.washington.edu/EVS; dbSNP rs55722784).
PreventionGenetics, part of Exact Sciences RCV000150191 SCV000307044 benign not specified criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000298330 SCV000426384 benign Pulmonary hypertension, primary, 1 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV001507121 SCV000560773 benign Primary pulmonary hypertension 2024-02-01 criteria provided, single submitter clinical testing
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000827070 SCV000602651 benign not provided 2023-10-05 criteria provided, single submitter clinical testing
GeneDx RCV000827070 SCV000968682 benign not provided 2018-04-30 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Ambry Genetics RCV002354341 SCV002656190 likely benign Inborn genetic diseases 2022-07-03 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Fulgent Genetics, Fulgent Genetics RCV002483298 SCV002801617 likely benign Pulmonary hypertension, primary, 1; Pulmonary venoocclusive disease 1 2021-10-29 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV000827070 SCV005240281 benign not provided criteria provided, single submitter not provided

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