ClinVar Miner

Submissions for variant NM_001242896.3(DEPDC5):c.2020C>T (p.Arg674Cys)

gnomAD frequency: 0.00218  dbSNP: rs181347577
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Total submissions: 12
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001080161 SCV000286364 benign Familial focal epilepsy with variable foci 2024-01-17 criteria provided, single submitter clinical testing
Center for Pediatric Genomic Medicine, Children's Mercy Hospital and Clinics RCV000513993 SCV000610347 likely benign not provided 2017-06-29 criteria provided, single submitter clinical testing
Ambry Genetics RCV002315690 SCV000848854 benign Inborn genetic diseases 2016-10-24 criteria provided, single submitter clinical testing This alteration is classified as benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Mendelics RCV000990423 SCV001141408 likely benign Epilepsy, familial focal, with variable foci 1 2019-05-28 criteria provided, single submitter clinical testing
Institute of Human Genetics, University of Leipzig Medical Center RCV000990423 SCV001440757 likely benign Epilepsy, familial focal, with variable foci 1 2019-01-01 criteria provided, single submitter clinical testing
GeneDx RCV000513993 SCV001945854 benign not provided 2018-09-26 criteria provided, single submitter clinical testing
Genome-Nilou Lab RCV000990423 SCV002039967 benign Epilepsy, familial focal, with variable foci 1 2021-11-07 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV000513993 SCV002563717 likely benign not provided 2024-05-01 criteria provided, single submitter clinical testing DEPDC5: BP4
PreventionGenetics, part of Exact Sciences RCV003919942 SCV004728985 likely benign DEPDC5-related disorder 2020-02-05 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Bioinformatics Core, Luxembourg Center for Systems Biomedicine RCV000656069 SCV000588345 pathogenic Childhood epilepsy with centrotemporal spikes 2017-01-01 no assertion criteria provided case-control CAADphred>15
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen RCV000513993 SCV001742215 likely benign not provided no assertion criteria provided clinical testing
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV000513993 SCV001928867 likely benign not provided no assertion criteria provided clinical testing

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