ClinVar Miner

Submissions for variant NM_001242896.3(DEPDC5):c.3567A>G (p.Thr1189=)

gnomAD frequency: 0.00063  dbSNP: rs142197878
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000465710 SCV000558212 benign Familial focal epilepsy with variable foci 2024-01-24 criteria provided, single submitter clinical testing
Ambry Genetics RCV002313210 SCV000848996 likely benign Inborn genetic diseases 2017-02-03 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
GeneDx RCV001653844 SCV001867483 benign not provided 2018-10-24 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV001653844 SCV002496735 likely benign not provided 2022-11-01 criteria provided, single submitter clinical testing DEPDC5: BP4, BP7, BS1
PreventionGenetics, part of Exact Sciences RCV003960068 SCV004771780 likely benign DEPDC5-related disorder 2021-05-03 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV001653844 SCV001931194 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV001653844 SCV001967380 likely benign not provided no assertion criteria provided clinical testing

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