ClinVar Miner

Submissions for variant NM_001276345.2(TNNT2):c.445C>A (p.Arg149Ser)

dbSNP: rs397516465
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000493712 SCV000583183 likely pathogenic not provided 2015-09-17 criteria provided, single submitter clinical testing The R139S variant has not been published as a pathogenic variant, nor has it been reported as a benign variant to our knowledge. The R139S variant was not observed in approximately 6,500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. The R139S variant is a semi-conservative amino acid substitution, which may impact secondary protein structure as these residues differ in some properties. This substitution occurs at a position that is conserved across species. In silico analysis predicts this variant is probably damaging to the protein structure/function. Missense variants in this same residue (R139C, R139H) and in nearby residues (R134G, Q138H, R141W, R141Q) have been reported in the Human Gene Mutation Database in association with DCM (Stenson et al., 2014), supporting the functional importance of this region of the protein.Therefore, this variant is likely pathogenic; however, the possibility that it is benign cannot be excluded.

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