ClinVar Miner

Submissions for variant NM_001291303.3(FAT4):c.7103C>A (p.Ala2368Glu)

gnomAD frequency: 0.00066  dbSNP: rs116568645
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000483029 SCV000574236 uncertain significance not provided 2024-01-11 criteria provided, single submitter clinical testing Reported along with a second variant in the FAT4 gene in a patient with Fanconi anemia in the published literature; however, segregation information and additional clinical information were not provided (PMID: 23623386); In silico analysis supports that this missense variant does not alter protein structure/function; This variant is associated with the following publications: (PMID: 23623386)
Baylor Genetics RCV001333192 SCV001525707 uncertain significance Hennekam lymphangiectasia-lymphedema syndrome 2 2018-04-18 criteria provided, single submitter clinical testing This variant was determined to be of uncertain significance according to ACMG Guidelines, 2015 [PMID:25741868].
Labcorp Genetics (formerly Invitae), Labcorp RCV000483029 SCV001696035 likely benign not provided 2025-01-18 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003902733 SCV004720378 likely benign FAT4-related disorder 2022-11-29 no assertion criteria provided clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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