ClinVar Miner

Submissions for variant NM_001303256.3(MORC2):c.1603C>T (p.Arg535Trp)

gnomAD frequency: 0.00001  dbSNP: rs576981610
Minimum review status: Collection method:
Minimum conflict level:
ClinVar version:
Total submissions: 2
Download table as spreadsheet
Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001215016 SCV001386735 uncertain significance Charcot-Marie-Tooth disease axonal type 2Z 2023-12-18 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with tryptophan, which is neutral and slightly polar, at codon 535 of the MORC2 protein (p.Arg535Trp). This variant is present in population databases (rs576981610, gnomAD 0.007%). This variant has not been reported in the literature in individuals affected with MORC2-related conditions. ClinVar contains an entry for this variant (Variation ID: 944588). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002402640 SCV002709175 uncertain significance Inborn genetic diseases 2022-03-22 criteria provided, single submitter clinical testing The p.R535W variant (also known as c.1603C>T), located in coding exon 16 of the MORC2 gene, results from a C to T substitution at nucleotide position 1603. The arginine at codon 535 is replaced by tryptophan, an amino acid with dissimilar properties. This amino acid position is not well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.