ClinVar Miner

Submissions for variant NM_001330078.2(NRXN1):c.2459G>A (p.Ser820Asn)

gnomAD frequency: 0.00013  dbSNP: rs80293130
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000728599 SCV000241881 likely benign not provided 2020-09-25 criteria provided, single submitter clinical testing
Genetic Services Laboratory, University of Chicago RCV000188271 SCV000248279 uncertain significance not specified 2014-07-18 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV000515422 SCV000611415 uncertain significance Pitt-Hopkins-like syndrome 2; Chromosome 2p16.3 deletion syndrome 2017-05-23 criteria provided, single submitter clinical testing
Invitae RCV000706193 SCV000835231 likely benign Pitt-Hopkins-like syndrome 2 2024-01-18 criteria provided, single submitter clinical testing
Ambry Genetics RCV002317133 SCV000851423 uncertain significance Inborn genetic diseases 2018-06-12 criteria provided, single submitter clinical testing The p.S860N variant (also known as c.2579G>A), located in coding exon 13 of the NRXN1 gene, results from a G to A substitution at nucleotide position 2579. The serine at codon 860 is replaced by asparagine, an amino acid with highly similar properties. This amino acid position is well conserved through mammals but not in all available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Eurofins Ntd Llc (ga) RCV000728599 SCV000856192 uncertain significance not provided 2017-08-23 criteria provided, single submitter clinical testing
Mayo Clinic Laboratories, Mayo Clinic RCV000728599 SCV002541829 uncertain significance not provided 2021-07-21 criteria provided, single submitter clinical testing

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