ClinVar Miner

Submissions for variant NM_001330360.2(POLA1):c.3955A>G (p.Ile1319Val)

gnomAD frequency: 0.00004  dbSNP: rs756416451
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001363916 SCV001560047 uncertain significance not provided 2025-01-01 criteria provided, single submitter clinical testing This sequence change replaces isoleucine, which is neutral and non-polar, with valine, which is neutral and non-polar, at codon 1313 of the POLA1 protein (p.Ile1313Val). The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database. This variant has not been reported in the literature in individuals affected with POLA1-related conditions. ClinVar contains an entry for this variant (Variation ID: 1055272). Invitae Evidence Modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) indicates that this missense variant is not expected to disrupt POLA1 protein function with a negative predictive value of 80%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Fulgent Genetics, Fulgent Genetics RCV002488118 SCV002787502 uncertain significance X-linked reticulate pigmentary disorder; X-linked intellectual disability, van Esch type 2022-01-17 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003898346 SCV004711105 likely benign POLA1-related disorder 2022-06-29 no assertion criteria provided clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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