ClinVar Miner

Submissions for variant NM_001352514.2(HLCS):c.1869del (p.Thr624fs)

dbSNP: rs2065031709
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001381046 SCV001579298 pathogenic Holocarboxylase synthetase deficiency 2022-11-28 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. ClinVar contains an entry for this variant (Variation ID: 1069237). This variant has not been reported in the literature in individuals affected with HLCS-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change creates a premature translational stop signal (p.Thr477Glnfs*9) in the HLCS gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in HLCS are known to be pathogenic (PMID: 16134170).
Baylor Genetics RCV001381046 SCV004199871 likely pathogenic Holocarboxylase synthetase deficiency 2024-02-08 criteria provided, single submitter clinical testing

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