ClinVar Miner

Submissions for variant NM_001364905.1(LRBA):c.1433C>T (p.Pro478Leu)

gnomAD frequency: 0.00001  dbSNP: rs896257229
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000594396 SCV000704021 uncertain significance not provided 2016-11-23 criteria provided, single submitter clinical testing
Invitae RCV001044156 SCV001207937 uncertain significance Combined immunodeficiency due to LRBA deficiency 2021-09-02 criteria provided, single submitter clinical testing This sequence change replaces proline with leucine at codon 478 of the LRBA protein (p.Pro478Leu). The proline residue is moderately conserved and there is a moderate physicochemical difference between proline and leucine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals affected with LRBA-related conditions. ClinVar contains an entry for this variant (Variation ID: 498814). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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