ClinVar Miner

Submissions for variant NM_001367624.2(ZNF469):c.10352G>A (p.Arg3451His)

gnomAD frequency: 0.00001  dbSNP: rs972190166
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
CeGaT Center for Human Genetics Tuebingen RCV000996377 SCV001151063 uncertain significance not provided 2016-05-01 criteria provided, single submitter clinical testing
Ambry Genetics RCV002382231 SCV002693729 uncertain significance Cardiovascular phenotype 2022-07-21 criteria provided, single submitter clinical testing The p.R3423H variant (also known as c.10268G>A), located in coding exon 2 of the ZNF469 gene, results from a G to A substitution at nucleotide position 10268. The arginine at codon 3423 is replaced by histidine, an amino acid with highly similar properties. This amino acid position is well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Invitae RCV000996377 SCV003503767 uncertain significance not provided 2022-05-27 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with histidine, which is basic and polar, at codon 3423 of the ZNF469 protein (p.Arg3423His). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with ZNF469-related conditions. ClinVar contains an entry for this variant (Variation ID: 808136). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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