ClinVar Miner

Submissions for variant NM_001370259.2(MEN1):c.30G>T (p.Leu10=)

gnomAD frequency: 0.00111  dbSNP: rs371192390
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Total submissions: 14
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000123385 SCV000166709 benign Multiple endocrine neoplasia, type 1 2025-02-02 criteria provided, single submitter clinical testing
Counsyl RCV000123385 SCV000487842 likely benign Multiple endocrine neoplasia, type 1 2015-11-21 criteria provided, single submitter clinical testing
Ambry Genetics RCV000491878 SCV000579697 likely benign Hereditary cancer-predisposing syndrome 2015-08-06 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
GeneDx RCV000609004 SCV000729149 likely benign not specified 2017-06-09 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
PreventionGenetics, part of Exact Sciences RCV000609004 SCV000805929 benign not specified 2017-05-30 criteria provided, single submitter clinical testing
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000757460 SCV000885693 benign not provided 2018-03-26 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV000757460 SCV001148325 likely benign not provided 2024-11-01 criteria provided, single submitter clinical testing MEN1: BP4, BP7
Illumina Laboratory Services, Illumina RCV000123385 SCV001265918 benign Multiple endocrine neoplasia, type 1 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases was too high to be consistent with this variant causing disease. Therefore, this variant is classified as benign.
Illumina Laboratory Services, Illumina RCV001108653 SCV001265919 uncertain significance Hyperparathyroidism 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases did not allow this variant to be ruled in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.
Institute for Clinical Genetics, University Hospital TU Dresden, University Hospital TU Dresden RCV000757460 SCV002010483 likely benign not provided 2021-11-03 criteria provided, single submitter clinical testing
Sema4, Sema4 RCV000491878 SCV002530066 benign Hereditary cancer-predisposing syndrome 2021-05-10 criteria provided, single submitter curation
Myriad Genetics, Inc. RCV000123385 SCV004018038 benign Multiple endocrine neoplasia, type 1 2023-04-17 criteria provided, single submitter clinical testing This variant is considered benign. This variant is a silent/synonymous amino acid change and it is not expected to impact splicing.
Color Diagnostics, LLC DBA Color Health RCV000123385 SCV004359155 benign Multiple endocrine neoplasia, type 1 2022-09-20 criteria provided, single submitter clinical testing
All of Us Research Program, National Institutes of Health RCV000123385 SCV004836548 benign Multiple endocrine neoplasia, type 1 2024-02-05 criteria provided, single submitter clinical testing

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