Total submissions: 2
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Invitae | RCV002553818 | SCV001221168 | uncertain significance | Blau syndrome; Regional enteritis | 2023-08-14 | criteria provided, single submitter | clinical testing | In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt NOD2 protein function. ClinVar contains an entry for this variant (Variation ID: 852157). This missense change has been observed in individual(s) with ulcerative colitis (PMID: 24595243, 29248579). This variant is present in population databases (rs375705174, gnomAD 0.006%). This sequence change replaces lysine, which is basic and polar, with glutamic acid, which is acidic and polar, at codon 953 of the NOD2 protein (p.Lys953Glu). |
Ce |
RCV003405265 | SCV004139325 | likely benign | not provided | 2022-08-01 | criteria provided, single submitter | clinical testing | NOD2: BP4 |