ClinVar Miner

Submissions for variant NM_001376.5(DYNC1H1):c.6511C>T (p.His2171Tyr)

dbSNP: rs1060502208
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000472493 SCV000548842 uncertain significance Charcot-Marie-Tooth disease axonal type 2O 2020-01-28 criteria provided, single submitter clinical testing In summary, this variant is a novel missense change that is not predicted to affect protein function. There is no indication that it causes disease, but the available evidence is currently insufficient to prove that conclusively. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated, but these predictions have not been confirmed by published functional studies. This variant is not present in population databases (ExAC no frequency) and has not been reported in the literature in individuals with a DYNC1H1-related disease. This sequence change replaces histidine with tyrosine at codon 2171 of the DYNC1H1 protein (p.His2171Tyr). The histidine residue is moderately conserved and there is a moderate physicochemical difference between histidine and tyrosine.
Ambry Genetics RCV002365637 SCV002659209 uncertain significance Inborn genetic diseases 2020-02-20 criteria provided, single submitter clinical testing The p.H2171Y variant (also known as c.6511C>T), located in coding exon 32 of the DYNC1H1 gene, results from a C to T substitution at nucleotide position 6511. The histidine at codon 2171 is replaced by tyrosine, an amino acid with similar properties. This amino acid position is well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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