ClinVar Miner

Submissions for variant NM_001378120.1(MBD5):c.236G>A (p.Gly79Glu)

gnomAD frequency: 0.00061  dbSNP: rs34995577
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Total submissions: 13
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000712260 SCV000241732 benign not provided 2019-10-02 criteria provided, single submitter clinical testing This variant is associated with the following publications: (PMID: 27222293, 21981781, 23055267)
Genetic Services Laboratory, University of Chicago RCV000188125 SCV000247908 likely benign not specified 2015-10-21 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000470089 SCV000557165 likely benign Intellectual disability, autosomal dominant 1 2025-01-19 criteria provided, single submitter clinical testing
Mayo Clinic Laboratories, Mayo Clinic RCV000470089 SCV000782477 benign Intellectual disability, autosomal dominant 1 2024-04-11 criteria provided, single submitter clinical testing BS1, BS2, BS4
Athena Diagnostics RCV000712260 SCV000842706 likely benign not provided 2018-04-13 criteria provided, single submitter clinical testing
Ambry Genetics RCV002314674 SCV000847582 likely benign Inborn genetic diseases 2021-12-14 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Mendelics RCV000470089 SCV001135962 likely benign Intellectual disability, autosomal dominant 1 2019-05-28 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV000712260 SCV004042083 likely benign not provided 2024-10-01 criteria provided, single submitter clinical testing MBD5: BS1
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000188125 SCV004847439 likely benign not specified 2024-02-05 criteria provided, single submitter clinical testing The p.Gly79Glu variant in MBD5 is classified as likely benign because it has been identified in 0.1% (75/68004) of European chromosomes by gnomAD (http://gnomad.broadinstitute.org, v.3.1.2). ACMG/AMP Criteria applied: BS1.
Eurofins Ntd Llc (ga) RCV000712260 SCV000232763 uncertain significance not provided 2018-01-16 flagged submission clinical testing
Elsea Laboratory, Baylor College of Medicine RCV000455290 SCV000264475 likely pathogenic MBD5 associated neurodevelopmental disorder 2012-10-01 flagged submission research
Fulgent Genetics, Fulgent Genetics RCV000470089 SCV000611479 uncertain significance Intellectual disability, autosomal dominant 1 2017-05-23 flagged submission clinical testing
PreventionGenetics, part of Exact Sciences RCV003907633 SCV004727682 likely benign MBD5-related disorder 2021-11-19 no assertion criteria provided clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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