ClinVar Miner

Submissions for variant NM_001378452.1(ITPR1):c.7491C>T (p.Ser2497=)

gnomAD frequency: 0.00022  dbSNP: rs371986594
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Illumina Laboratory Services, Illumina RCV001148572 SCV001309478 benign Autosomal dominant cerebellar ataxia 2018-03-26 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Athena Diagnostics RCV001288655 SCV001475930 benign not specified 2020-08-25 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV002070802 SCV002487061 benign not provided 2023-09-19 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV002070802 SCV004146802 likely benign not provided 2022-03-01 criteria provided, single submitter clinical testing ITPR1: BP7, BS2
GeneDx RCV002070802 SCV005080856 uncertain significance not provided 2023-12-08 criteria provided, single submitter clinical testing In silico analysis suggests this variant may impact gene splicing. In the absence of RNA/functional studies, the actual effect of this sequence change is unknown.; Has not been previously published as pathogenic or benign to our knowledge

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