ClinVar Miner

Submissions for variant NM_001378615.1(CC2D2A):c.2326G>A (p.Gly776Arg)

gnomAD frequency: 0.00067  dbSNP: rs200764366
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Total submissions: 10
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001084783 SCV000285830 likely benign Familial aplasia of the vermis; Meckel-Gruber syndrome 2024-12-16 criteria provided, single submitter clinical testing
GeneDx RCV000726192 SCV000329212 uncertain significance not provided 2024-12-11 criteria provided, single submitter clinical testing Reported in an individual in published literature; however, this individual was also noted to have additional variants in another gene which may explain the phenotype (PMID: 28392475); Also reported in an individual with anophthalmia, microphthalmia, or coloboma (PMID: 26130484); In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; This variant is associated with the following publications: (PMID: 28392475, 36319078, 26130484)
Eurofins Ntd Llc (ga) RCV000726192 SCV000342757 uncertain significance not provided 2017-06-28 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV000765757 SCV000897145 uncertain significance COACH syndrome 1; Meckel syndrome, type 6; Joubert syndrome 9 2018-10-31 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV001150183 SCV001311196 uncertain significance CC2D2A-related disorder 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases did not allow this variant to be ruled in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.
Illumina Laboratory Services, Illumina RCV001150184 SCV001311197 uncertain significance Meckel syndrome, type 6 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases did not allow this variant to be ruled in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.
Illumina Laboratory Services, Illumina RCV001150185 SCV001311198 uncertain significance Joubert syndrome 9 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases did not allow this variant to be ruled in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.
PreventionGenetics, part of Exact Sciences RCV001150183 SCV004745419 likely benign CC2D2A-related disorder 2022-02-07 no assertion criteria provided clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Institute of Human Genetics, Univ. Regensburg, Univ. Regensburg RCV004816441 SCV005069555 uncertain significance Optic atrophy 2023-01-01 no assertion criteria provided clinical testing
Institute of Human Genetics, Univ. Regensburg, Univ. Regensburg RCV004816440 SCV005073454 uncertain significance Retinal dystrophy 2023-01-01 no assertion criteria provided clinical testing

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