Submissions for variant NM_001378615.1(CC2D2A):c.2882T>C (p.Ile961Thr)

gnomAD frequency: 0.00019  dbSNP: rs76626268

Total submissions: 4

Submitter	RCV	SCV	Clinical significance	Condition	Last evaluated	Review status	Method	Comment
Illumina Laboratory Services, Illumina	RCV001146037	SCV001306750	benign	Joubert syndrome 9	2017-04-27	criteria provided, single submitter	clinical testing	This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases was too high to be consistent with this variant causing disease. Therefore, this variant is classified as benign.
Illumina Laboratory Services, Illumina	RCV001146038	SCV001306751	likely benign	Meckel syndrome, type 6	2017-04-27	criteria provided, single submitter	clinical testing	This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). Publications were found based on this search. The evidence from the literature, in combination with allele frequency data from public databases where available, was sufficient to determine this variant is unlikely to cause disease. Therefore, this variant is classified as likely benign.
Labcorp Genetics (formerly Invitae), Labcorp	RCV001506167	SCV001711082	likely benign	Familial aplasia of the vermis; Meckel-Gruber syndrome	2024-10-28	criteria provided, single submitter	clinical testing
PreventionGenetics, part of Exact Sciences	RCV004538370	SCV004717982	likely benign	CC2D2A-related disorder	2022-11-04	no assertion criteria provided	clinical testing	This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).