ClinVar Miner

Submissions for variant NM_001379200.1(TBX1):c.124C>T (p.Pro42Ser)

dbSNP: rs2145827697
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001366937 SCV001563261 uncertain significance DiGeorge syndrome 2020-11-06 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Not Available"; Align-GVGD: "Class C0"). This variant has been observed in one or more individuals who were not affected with TBX1-related conditions (Invitae). The frequency data for this variant in the population databases is considered unreliable, as metrics indicate insufficient coverage at this position in the ExAC database. This sequence change replaces proline with serine at codon 33 of the TBX1 protein (p.Pro33Ser). The proline residue is moderately conserved and there is a moderate physicochemical difference between proline and serine.

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