Total submissions: 2
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Invitae | RCV001208673 | SCV001380076 | uncertain significance | Joubert syndrome 21 | 2022-03-31 | criteria provided, single submitter | clinical testing | This sequence change replaces arginine, which is basic and polar, with glutamine, which is neutral and polar, at codon 989 of the CSPP1 protein (p.Arg989Gln). This variant is present in population databases (rs367949127, gnomAD 0.01%). This missense change has been observed in individual(s) with clinical features of Meckel-Gruber syndrome (PMID: 24360803). ClinVar contains an entry for this variant (Variation ID: 939297). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. |
Gene |
RCV001799743 | SCV002043887 | uncertain significance | not provided | 2021-06-25 | criteria provided, single submitter | clinical testing | Not observed at significant frequency in large population cohorts (Lek et al., 2016); In silico analysis supports that this missense variant does not alter protein structure/function; This variant is associated with the following publications: (PMID: 27535533, 24360808, 24360803) |