ClinVar Miner

Submissions for variant NM_001384140.1(PCDH15):c.1138G>A (p.Gly380Ser)

gnomAD frequency: 0.22813  dbSNP: rs10825269
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Total submissions: 12
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000039695 SCV000063384 benign not specified 2009-06-23 criteria provided, single submitter clinical testing
Eurofins Ntd Llc (ga) RCV000039695 SCV000225429 benign not specified 2015-02-06 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV000039695 SCV000315054 benign not specified criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000407693 SCV000363222 benign Usher syndrome type 1 2018-03-06 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Mendelics RCV000988364 SCV001138052 benign Usher syndrome type 1F 2019-05-28 criteria provided, single submitter clinical testing
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000086940 SCV001158882 benign not provided 2023-11-29 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000086940 SCV001730440 benign not provided 2025-02-03 criteria provided, single submitter clinical testing
Genome-Nilou Lab RCV000988364 SCV001750554 benign Usher syndrome type 1F 2021-07-01 criteria provided, single submitter clinical testing
GeneDx RCV000086940 SCV001884915 benign not provided 2015-03-03 criteria provided, single submitter clinical testing This variant is associated with the following publications: (PMID: 21569298, 19816713)
Fulgent Genetics, Fulgent Genetics RCV002490548 SCV002796286 likely benign Autosomal recessive nonsyndromic hearing loss 23; Usher syndrome type 1D; Usher syndrome type 1F 2022-01-13 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV000086940 SCV005322709 benign not provided criteria provided, single submitter not provided
NEI Ophthalmic Genomics Laboratory, National Institutes of Health RCV000086940 SCV000119192 not provided not provided no assertion provided not provided

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