ClinVar Miner

Submissions for variant NM_001384140.1(PCDH15):c.1362C>T (p.Val454=)

gnomAD frequency: 0.00267  dbSNP: rs61735479
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Total submissions: 8
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000039702 SCV000063391 benign not specified 2012-03-22 criteria provided, single submitter clinical testing Val454Val in exon 12 of PCDH15: This variant is not expected to have clinical si gnificance because it does not alter an amino acid residue, is not located withi n the splice consensus sequence, has been identified in .014% (1/7020) of Europe an American chromosomes and 0.96% (36/3738) of African American chromosomes in a broad population by the NHLBI Exome sequencing project (http://evs.gs.washingto n.edu/EVS/ ; dbSNP rs61735479).
Eurofins Ntd Llc (ga) RCV000039702 SCV000114266 benign not specified 2013-08-14 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000272282 SCV000363211 uncertain significance Usher syndrome type 1 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
GeneDx RCV000963503 SCV000724816 benign not provided 2019-03-12 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV000963503 SCV001110667 benign not provided 2025-01-20 criteria provided, single submitter clinical testing
Clinical Genetics, Academic Medical Center RCV000039702 SCV001918367 benign not specified no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000963503 SCV001969473 likely benign not provided no assertion criteria provided clinical testing
Natera, Inc. RCV001831683 SCV002091736 benign Usher syndrome type 1F 2019-10-25 no assertion criteria provided clinical testing

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