ClinVar Miner

Submissions for variant NM_001453.3(FOXC1):c.508C>T (p.Arg170Trp)

dbSNP: rs1581373890
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000817211 SCV000957761 pathogenic Axenfeld-Rieger syndrome type 3 2023-05-16 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be disruptive. ClinVar contains an entry for this variant (Variation ID: 660083). This missense change has been observed in individual(s) with clinical features of FOXC1-related conditions (PMID: 23239455; Invitae). In at least one individual the variant was observed to be de novo. It has also been observed to segregate with disease in related individuals. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces arginine, which is basic and polar, with tryptophan, which is neutral and slightly polar, at codon 170 of the FOXC1 protein (p.Arg170Trp).
Human Developmental Genetics Laboratory, Medical College of Wisconsin RCV000817211 SCV002538977 pathogenic Axenfeld-Rieger syndrome type 3 2022-06-23 criteria provided, single submitter research

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