ClinVar Miner

Submissions for variant NM_001556.3(IKBKB):c.1933C>T (p.Arg645Trp)

gnomAD frequency: 0.00001  dbSNP: rs753922163
Minimum review status: Collection method:
Minimum conflict level:
ClinVar version:
Total submissions: 2
Download table as spreadsheet
Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Genomic Research Center, Shahid Beheshti University of Medical Sciences RCV000785097 SCV000923654 likely benign Severe combined immunodeficiency due to IKK2 deficiency 2019-01-01 criteria provided, single submitter clinical testing
Invitae RCV000785097 SCV001484676 uncertain significance Severe combined immunodeficiency due to IKK2 deficiency 2022-03-12 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with tryptophan, which is neutral and slightly polar, at codon 645 of the IKBKB protein (p.Arg645Trp). This variant is present in population databases (rs753922163, gnomAD 0.02%). This variant has not been reported in the literature in individuals affected with IKBKB-related conditions. ClinVar contains an entry for this variant (Variation ID: 634580). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt IKBKB protein function. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.