ClinVar Miner

Submissions for variant NM_001692.4(ATP6V1B1):c.40G>A (p.Gly14Ser)

gnomAD frequency: 0.00020  dbSNP: rs111306070
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000939451 SCV001085295 benign not provided 2024-01-29 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV001137237 SCV001297159 likely benign Renal tubular acidosis with progressive nerve deafness 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as likely benign is not then subjected to further curation. The score for this variant resulted in a classification of likely benign for this disease.
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV001195295 SCV001365612 benign not specified 2019-09-25 criteria provided, single submitter clinical testing The p.Gly14Ser variant in ATP6V1B1 is classified as benign because it has been identified in 0.69% (138/19944) of East Asian chromosomes by gnomAD (http://gnomad.broadinstitute.org). ACMG/AMP Criteria applied: BA1.
GeneDx RCV000939451 SCV001804769 likely benign not provided 2019-12-17 criteria provided, single submitter clinical testing
Natera, Inc. RCV001137237 SCV001459114 uncertain significance Renal tubular acidosis with progressive nerve deafness 2019-12-24 no assertion criteria provided clinical testing

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