Total submissions: 2
| Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
|---|---|---|---|---|---|---|---|---|
| Invitae | RCV001379003 | SCV001576717 | likely pathogenic | 3-methylglutaconic aciduria type 1 | 2022-11-11 | criteria provided, single submitter | clinical testing | In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. ClinVar contains an entry for this variant (Variation ID: 1067674). Disruption of this splice site has been observed in individual(s) with clinical feature of AUH-related conditions (Invitae). This variant is present in population databases (rs757748207, gnomAD 0.004%). This sequence change affects a splice site in intron 6 of the AUH gene. It is expected to disrupt RNA splicing. Variants that disrupt the donor or acceptor splice site typically lead to a loss of protein function (PMID: 16199547), and loss-of-function variants in AUH are known to be pathogenic (PMID: 12655555, 20882351). |
| Gene |
RCV003318687 | SCV004023034 | likely pathogenic | not provided | 2023-08-08 | criteria provided, single submitter | clinical testing | Canonical splice site variant predicted to result in a null allele in a gene for which loss of function is a known mechanism of disease; Not observed at significant frequency in large population cohorts (gnomAD); Has not been previously published as pathogenic or benign to our knowledge |