ClinVar Miner

Submissions for variant NM_001793.6(CDH3):c.805A>C (p.Met269Leu)

gnomAD frequency: 0.00341  dbSNP: rs36038900
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Total submissions: 10
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000326394 SCV000337867 likely benign not specified 2015-12-07 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000356369 SCV000398502 likely benign EEM syndrome 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as likely benign is not then subjected to further curation. The score for this variant resulted in a classification of likely benign for this disease.
CeGaT Center for Human Genetics Tuebingen RCV000658749 SCV000780538 likely benign not provided 2024-09-01 criteria provided, single submitter clinical testing CDH3: BS2
Labcorp Genetics (formerly Invitae), Labcorp RCV000658749 SCV001110856 benign not provided 2025-01-27 criteria provided, single submitter clinical testing
GeneDx RCV000658749 SCV001836316 benign not provided 2020-09-25 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV000658749 SCV005218599 likely benign not provided criteria provided, single submitter not provided
Laboratory of Diagnostic Genome Analysis, Leiden University Medical Center (LUMC) RCV000658749 SCV001799418 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics, Academic Medical Center RCV000658749 SCV001922684 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000658749 SCV001972142 likely benign not provided no assertion criteria provided clinical testing
PreventionGenetics, part of Exact Sciences RCV003920087 SCV004729290 benign CDH3-related disorder 2019-06-05 no assertion criteria provided clinical testing This variant is classified as benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

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