ClinVar Miner

Submissions for variant NM_001854.4(COL11A1):c.2608C>T (p.Arg870Trp)

gnomAD frequency: 0.00001  dbSNP: rs778379327
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Department of Otolaryngology – Head & Neck Surgery, Cochlear Implant Center RCV001375159 SCV001571717 likely pathogenic Hearing impairment 2021-04-12 criteria provided, single submitter clinical testing PM2_Moderate, PP3_Strong
Invitae RCV003120590 SCV003786867 uncertain significance not provided 2023-12-15 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with tryptophan, which is neutral and slightly polar, at codon 870 of the COL11A1 protein (p.Arg870Trp). This variant is present in population databases (rs778379327, gnomAD 0.01%). This variant has not been reported in the literature in individuals affected with COL11A1-related conditions. ClinVar contains an entry for this variant (Variation ID: 1064929). Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may create or strengthen a splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV003375273 SCV004080209 uncertain significance Inborn genetic diseases 2023-08-02 criteria provided, single submitter clinical testing The c.2608C>T (p.R870W) alteration is located in exon 32 (coding exon 32) of the COL11A1 gene. This alteration results from a C to T substitution at nucleotide position 2608, causing the arginine (R) at amino acid position 870 to be replaced by a tryptophan (W). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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