ClinVar Miner

Submissions for variant NM_001876.4(CPT1A):c.407T>C (p.Met136Thr)

gnomAD frequency: 0.00001  dbSNP: rs1205599161
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000757134 SCV000885258 uncertain significance not provided 2017-08-14 criteria provided, single submitter clinical testing The p.Met136Thr variant has not been reported in the medical literature, is not listed in gene-specific variant databases, nor has it been previously identified in our laboratory. It is listed in the Genome Aggregation Database (gnomAD) browser with a frequency in African populations of 0.01% (identified in 1 out of 8,728 chromosomes). The methionine at codon 136 is moderately conserved considering 13 species (Alamut software v2.9), and computational analyses return mixed results regarding the effect of this variant on CPT1A protein structure/function (SIFT: tolerated, PolyPhen2: possibly damaging, and Mutation Taster: disease causing). Thus, based on the available information, the clinical significance of the p.Met136Thr variant cannot be determined with certainty.

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