ClinVar Miner

Submissions for variant NM_001903.5(CTNNA1):c.292C>T (p.Arg98Ter)

dbSNP: rs773235871
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001359080 SCV001554941 pathogenic not provided 2024-01-16 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Arg98*) in the CTNNA1 gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in CTNNA1 are known to be pathogenic (PMID: 32051609, 34425242). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with CTNNA1-related conditions. ClinVar contains an entry for this variant (Variation ID: 1051089). For these reasons, this variant has been classified as Pathogenic.
Ambry Genetics RCV002438828 SCV002748782 uncertain significance Hereditary cancer-predisposing syndrome 2024-05-13 criteria provided, single submitter clinical testing The p.R98* variant (also known as c.292C>T), located in coding exon 2 of the CTNNA1 gene, results from a C to T substitution at nucleotide position 292. This changes the amino acid from an arginine to a stop codon within coding exon 2. This alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay. The evidence for this gene-disease relationship is limited; therefore, the clinical significance of this alteration is unclear.
Myriad Genetics, Inc. RCV003136022 SCV003806511 pathogenic Hereditary diffuse gastric adenocarcinoma 2023-01-17 criteria provided, single submitter clinical testing This variant is considered pathogenic. This variant creates a termination codon and is predicted to result in premature protein truncation.

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