ClinVar Miner

Submissions for variant NM_001927.4(DES):c.-30_-18dup

gnomAD frequency: 0.01968  dbSNP: rs794728983
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000183343 SCV001442560 benign not specified 2020-10-19 criteria provided, single submitter clinical testing Variant summary: DES c.-30_-18dup13 is located in the untranslated mRNA region upstream of the initiation codon. The variant allele was found at a frequency of 0.0011 in 165222 control chromosomes, predominantly at a frequency of 0.024 within the African or African-American subpopulation in the gnomAD database, including 5 homozygotes. The observed variant frequency within African or African-American control individuals in the gnomAD database is approximately 768-fold of the estimated maximal expected allele frequency for a pathogenic variant in DES causing Dilated Cardiomyopathy phenotype (3.1e-05), strongly suggesting that the variant is a benign polymorphism found primarily in populations of African or African-American origin. A co-occurrence with a pathogenic variant has been reported (MYBPC3 c.3330+5G>C; Internal testing), providing supporting evidence for a benign role. No clinical diagnostic laboratories have submitted clinical-significance assessments for this variant to ClinVar after 2014. Based on the evidence outlined above, the variant was classified as benign.
GeneDx RCV001529191 SCV001754176 benign not provided 2015-04-01 criteria provided, single submitter clinical testing
GeneDx RCV000183343 SCV000235775 benign not specified 2014-06-04 flagged submission clinical testing The variant is found in DCM,DCM-CRDM panel(s).
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen RCV001529191 SCV001742242 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics, Academic Medical Center RCV000183343 SCV001919457 benign not specified no assertion criteria provided clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ RCV001529191 SCV001956893 likely benign not provided no assertion criteria provided clinical testing

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