ClinVar Miner

Submissions for variant NM_001994.3(F13B):c.1152_1155dup (p.Pro386fs)

gnomAD frequency: 0.00007  dbSNP: rs748757906
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Victorian Clinical Genetics Services, Murdoch Childrens Research Institute RCV002272825 SCV002557225 pathogenic Factor XIII, b subunit, deficiency of 2020-05-26 criteria provided, single submitter clinical testing Based on the classification scheme VCGS_Germline_v1.1.1, this variant is classified as pathogenic. Following criteria are met: 0102 - Loss-of-function is a known mechanism of disease for this gene. (N) 0106 - This gene is known to be associated with autosomal recessive disease. (N) 0201 - Variant is predicted to cause nonsense-mediated decay (NMD) and loss of protein (exon 7 of 12). (P) 0251 - Variant is heterozygous. (N) 0304 - Variant is present in gnomAD <0.01 for a recessive condition (18 heterozygotes, 1 homozygote). (P) 0703 – Two comparable variants also predicted to cause NMD, have moderate previous evidence for pathogenicity, (ClinVar). (P) 0803 - Low previous evidence of pathogenicity in a single homozygote individual (PMID: 20331752). (P) 0905 - No segregation evidence has been identified for this variant. (N) 1007 - No published functional evidence has been identified for this variant. (N) 1208 - Inheritance information for this variant is not currently available. (N) Legend: (P) - Pathogenic, (N) - Neutral, (B) - Benign

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