ClinVar Miner

Submissions for variant NM_002016.2(FLG):c.1714C>T (p.Arg572Ter)

dbSNP: rs200601767
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV002034874 SCV002107379 pathogenic not provided 2023-09-01 criteria provided, single submitter clinical testing Nonsense variant in the C-terminus predicted to result in protein truncation, as the last 3490 amino acids are lost, and other loss-of-function variants have been reported downstream in the Human Gene Mutation Database (HGMD); Has not been previously published as pathogenic or benign to our knowledge; This variant is associated with the following publications: (PMID: 24077912, 16444271)
3billion RCV003152774 SCV003842088 likely pathogenic Ichthyosis vulgaris 2023-02-23 criteria provided, single submitter clinical testing The variant is observed at an extremely low frequency in the gnomAD v2.1.1 dataset (total allele frequency: 0.010%). This variant was predicted to result in a loss or disruption of normal protein function through protein truncation. The predicted truncated protein may be shortened by more than 10%. The variant has been reported to be associated with FLG -related disorder (ClinVar ID: VCV001345023). However, the evidence of pathogenicity is insufficient at this time. Therefore, this variant is classified as Likely pathogenic according to the recommendation of ACMG/AMP guideline.
Genome-Nilou Lab RCV003152774 SCV004050268 likely pathogenic Ichthyosis vulgaris 2023-04-11 criteria provided, single submitter clinical testing
Genetics and Genomic Medicine Centre, NeuroGen Healthcare, NeuroGen Healthcare RCV003152774 SCV005873592 likely pathogenic Ichthyosis vulgaris 2020-12-19 criteria provided, single submitter clinical testing

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