ClinVar Miner

Submissions for variant NM_002109.6(HARS1):c.612A>G (p.Ile204Met)

dbSNP: rs1562008815
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000699267 SCV000827969 uncertain significance Usher syndrome type 3B 2019-05-29 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0"). This variant has not been reported in the literature in individuals with HARS-related disease. This variant is not present in population databases (ExAC no frequency). This sequence change replaces isoleucine with methionine at codon 204 of the HARS protein (p.Ile204Met). The isoleucine residue is highly conserved and there is a small physicochemical difference between isoleucine and methionine.
Ambry Genetics RCV002462042 SCV002755236 uncertain significance Inborn genetic diseases 2019-08-30 criteria provided, single submitter clinical testing The p.I204M variant (also known as c.612A>G), located in coding exon 6 of the HARS gene, results from an A to G substitution at nucleotide position 612. The isoleucine at codon 204 is replaced by methionine, an amino acid with highly similar properties. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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