ClinVar Miner

Submissions for variant NM_002109.6(HARS1):c.782C>G (p.Pro261Arg)

gnomAD frequency: 0.00001  dbSNP: rs1319398620
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000690481 SCV000818168 uncertain significance Usher syndrome type 3B 2022-07-19 criteria provided, single submitter clinical testing This sequence change replaces proline, which is neutral and non-polar, with arginine, which is basic and polar, at codon 261 of the HARS protein (p.Pro261Arg). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may create or strengthen a splice site. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. ClinVar contains an entry for this variant (Variation ID: 569771). This variant has not been reported in the literature in individuals affected with HARS-related conditions. This variant is present in population databases (no rsID available, gnomAD 0.009%).

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