ClinVar Miner

Submissions for variant NM_002180.2(IGHMBP2):c.1198G>A (p.Asp400Asn) (rs779654686)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000642636 SCV000764323 uncertain significance Spinal muscular atrophy, distal, autosomal recessive, 1; Charcot-Marie-Tooth disease, axonal, type 2S 2017-12-27 criteria provided, single submitter clinical testing This sequence change replaces aspartic acid with asparagine at codon 400 of the IGHMBP2 protein (p.Asp400Asn). The aspartic acid residue is highly conserved and there is a small physicochemical difference between aspartic acid and asparagine. This variant is present in population databases (rs779654686, ExAC 0.002%). This variant has not been reported in the literature in individuals with IGHMBP2-related disease. Algorithms developed to predict the effect of missense changes on protein structure and function do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Probably Damaging"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Inherited Neuropathy Consortium RCV001027461 SCV001190029 uncertain significance Charcot-Marie-Tooth disease no assertion criteria provided research

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