ClinVar Miner

Submissions for variant NM_002180.3(IGHMBP2):c.151C>G (p.Gln51Glu)

gnomAD frequency: 0.00506  dbSNP: rs117061430
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Total submissions: 10
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
PreventionGenetics, part of Exact Sciences RCV004547633 SCV000308710 benign IGHMBP2-related disorder 2023-04-27 criteria provided, single submitter clinical testing This variant is classified as benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Eurofins Ntd Llc (ga) RCV000254044 SCV000337956 benign not specified 2015-12-22 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000625146 SCV000373752 likely benign Autosomal recessive distal spinal muscular atrophy 1 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as likely benign is not then subjected to further curation. The score for this variant resulted in a classification of likely benign for this disease.
GeneDx RCV000254044 SCV000513265 benign not specified 2016-04-04 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
CeGaT Center for Human Genetics Tuebingen RCV000513582 SCV000608600 likely benign not provided 2024-04-01 criteria provided, single submitter clinical testing IGHMBP2: BS2
Invitae RCV001082951 SCV000642309 benign Autosomal recessive distal spinal muscular atrophy 1; Charcot-Marie-Tooth disease axonal type 2S 2024-01-31 criteria provided, single submitter clinical testing
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV000625146 SCV000743874 likely benign Autosomal recessive distal spinal muscular atrophy 1 2016-03-11 criteria provided, single submitter clinical testing
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000513582 SCV001158411 benign not provided 2023-11-09 criteria provided, single submitter clinical testing
Molecular Genetics Laboratory, London Health Sciences Centre RCV001173578 SCV001336677 likely benign Charcot-Marie-Tooth disease criteria provided, single submitter clinical testing
Clinical Genetics, Academic Medical Center RCV000254044 SCV001924407 benign not specified no assertion criteria provided clinical testing

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