ClinVar Miner

Submissions for variant NM_002230.4(JUP):c.1378C>T (p.Arg460Cys)

gnomAD frequency: 0.00001  dbSNP: rs782575391
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001048141 SCV001212131 uncertain significance Naxos disease; Arrhythmogenic right ventricular dysplasia 12 2024-01-15 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with cysteine, which is neutral and slightly polar, at codon 460 of the JUP protein (p.Arg460Cys). This variant is present in population databases (rs782575391, gnomAD 0.006%). This variant has not been reported in the literature in individuals affected with JUP-related conditions. ClinVar contains an entry for this variant (Variation ID: 845130). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be disruptive. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002379533 SCV002696434 uncertain significance Cardiovascular phenotype 2019-06-18 criteria provided, single submitter clinical testing The p.R460C variant (also known as c.1378C>T), located in coding exon 7 of the JUP gene, results from a C to T substitution at nucleotide position 1378. The arginine at codon 460 is replaced by cysteine, an amino acid with highly dissimilar properties. This amino acid position is highly conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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