ClinVar Miner

Submissions for variant NM_002292.4(LAMB2):c.598G>A (p.Val200Ile)

gnomAD frequency: 0.00034  dbSNP: rs149325182
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001203735 SCV001374911 uncertain significance Pierson syndrome; LAMB2-related infantile-onset nephrotic syndrome 2022-06-04 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The isoleucine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. ClinVar contains an entry for this variant (Variation ID: 935194). This variant has not been reported in the literature in individuals affected with LAMB2-related conditions. This variant is present in population databases (rs149325182, gnomAD 0.08%). This sequence change replaces valine, which is neutral and non-polar, with isoleucine, which is neutral and non-polar, at codon 200 of the LAMB2 protein (p.Val200Ile).
Athena Diagnostics Inc RCV001288665 SCV001475943 uncertain significance not provided 2020-08-03 criteria provided, single submitter clinical testing
Ambry Genetics RCV002561132 SCV003705560 uncertain significance Inborn genetic diseases 2021-12-03 criteria provided, single submitter clinical testing The c.598G>A (p.V200I) alteration is located in exon 5 (coding exon 5) of the LAMB2 gene. This alteration results from a G to A substitution at nucleotide position 598, causing the valine (V) at amino acid position 200 to be replaced by an isoleucine (I). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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