ClinVar Miner

Submissions for variant NM_002296.4(LBR):c.851C>T (p.Thr284Met)

gnomAD frequency: 0.00004  dbSNP: rs371750924
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000757430 SCV000885648 uncertain significance not provided 2018-06-17 criteria provided, single submitter clinical testing The LBR c.851C>T; p.Thr284Met variant (rs371750924), to our knowledge, is not reported in the medical literature or in gene specific databases, but is observed in the general population at an overall frequency of 0.008% (21/264498 alleles) with increased frequency in the Latino population (0.05%) in the Genome Aggregation Database. The threonine at codon 284 is weakly conserved, and computational algorithms (PolyPhen-2, SIFT) predict that this variant is tolerated. Due to limited information regarding this variant, its clinical significance cannot be determined with certainty. Pathogenic LBR variants are associated with autosomal recessive Greenberg skeletal dysplasia (MIM;215140) and autosomal dominant Pelger-Huet anomaly (MIM:169400). If this variant is later found to be pathogenic, this individual is predicted to either be a carrier of Greenberg skeletal dysplasia or affected with Pelger-Huet anomaly.
Invitae RCV000757430 SCV001659756 likely benign not provided 2024-01-19 criteria provided, single submitter clinical testing
Ambry Genetics RCV002533805 SCV003714331 uncertain significance Inborn genetic diseases 2021-10-20 criteria provided, single submitter clinical testing The c.851C>T (p.T284M) alteration is located in exon 7 (coding exon 6) of the LBR gene. This alteration results from a C to T substitution at nucleotide position 851, causing the threonine (T) at amino acid position 284 to be replaced by a methionine (M). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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