ClinVar Miner

Submissions for variant NM_002303.6(LEPR):c.2096C>T (p.Thr699Met)

gnomAD frequency: 0.01048  dbSNP: rs34499590
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Personalized Diabetes Medicine Program, University of Maryland School of Medicine RCV000445476 SCV000536949 benign Monogenic diabetes 2018-12-21 criteria provided, single submitter research ACMG criteria: BA1 (3.6% in Africans in gnomAD), BS2 (15 homozygotes in gnomAD)= benign (BP4/3 predictors + PP3/7 predictors + REVEL: 0.271: conflicting evidence, not using)
Illumina Laboratory Services, Illumina RCV001100147 SCV001256653 benign Obesity due to leptin receptor gene deficiency 2017-04-27 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). No publications were found based on this search. Allele frequency data from public databases was too high to be consistent with this variant causing disease. Therefore, this variant is classified as benign.
GeneDx RCV001675893 SCV001895790 benign not provided 2021-05-11 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV001675893 SCV002405257 benign not provided 2024-01-23 criteria provided, single submitter clinical testing
Breakthrough Genomics, Breakthrough Genomics RCV001675893 SCV005280293 benign not provided criteria provided, single submitter not provided

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